add_max_feature: Assign samples to a new group variable based on the highest...
In aaronwolen/metafiler: metagenomic profile plots
add_max_feature R Documentation
Assign samples to a new group variable based on the highest feature
Description
Assign samples to a new group variable based on the highest feature
Usage
add_max_feature(data, group = ".group", reorder.samples = TRUE,
top.n = NULL)
Arguments
data
ExpressionSet object.
group
name of new grouping variable.
reorder.samples
If TRUE, samples are reordered by the
prevalance of their assigned group and rank of the assigned feature's value
within the group.
top.n
Limit the number of levels in the new grouping variable to the
top.n most prevalent. Samples not among the most prevalent groups
are assigned to "Othere".
Examples
profiles <- add_max_feature(profiles, group = "enterotype")
profiles$enterotype
aaronwolen/metafiler documentation built on Feb. 16, 2024, 12:41 a.m.
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| add_max_feature | R Documentation |
Assign samples to a new group variable based on the highest feature
Description
Assign samples to a new group variable based on the highest feature
Usage
add_max_feature(data, group = ".group", reorder.samples = TRUE,
top.n = NULL)
Arguments
data |
|
group |
name of new grouping variable. |
reorder.samples |
If |
top.n |
Limit the number of levels in the new grouping variable to the
|
Examples
profiles <- add_max_feature(profiles, group = "enterotype")
profiles$enterotype
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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