read_metaphalan: Read metaphalan results
In aaronwolen/metafiler: metagenomic profile plots
read_metaphalan R Documentation
Read metaphalan results
Description
Read metaphalan results
Usage
read_metaphalan(file, taxa.level = "species")
Arguments
file
the name of the file which the data are to be read from.
taxa.level
the taxonomic level for which the relative abundance output will be loaded.
Value
ExpressionSet
Examples
## Not run:
prof.file <- system.file("inst/extdata/profiles.txt", package = "metafiler")
read_metaphalan(prof.file)
## End(Not run)
aaronwolen/metafiler documentation built on Feb. 16, 2024, 12:41 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| read_metaphalan | R Documentation |
Read metaphalan results
Description
Read metaphalan results
Usage
read_metaphalan(file, taxa.level = "species")
Arguments
file |
the name of the file which the data are to be read from. |
taxa.level |
the taxonomic level for which the relative abundance output will be loaded. |
Value
ExpressionSet
Examples
## Not run:
prof.file <- system.file("inst/extdata/profiles.txt", package = "metafiler")
read_metaphalan(prof.file)
## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.