to_dataframe: Convert an ExpressionSet object to a tidy data.frame

View source: R/dataframes.r

to_dataframeR Documentation

Convert an ExpressionSet object to a tidy data.frame

Description

In the resulting data.frame columns containing samples and features are factors with levels mirroring the order of the ExpressionSet object.

Usage

to_dataframe(data, add.pvars = TRUE, add.fvars = TRUE)

Arguments

data

an ExpressionSet object

add.pvars

should phenotype variables stored in pData(data) be included in the data.frame?

add.fvars

should feature variables stored in fData(data) be included in the data.frame?


aaronwolen/metafiler documentation built on Feb. 16, 2024, 12:41 a.m.