Description Usage Format Source References See Also

Summary statistics for the bipolar disorder (BIP) subset of PGC's cross disorder analysis.

1 |

A data frame with 11 variables:

`snpid`

SNP rs identifier

`hg18chr`

hg18 chromosome (1-22)

`bp`

hg18 base position of SNP

`a1`

reference allele (not necessarily minor allele)

`a2`

alternate allele

`or`

odds ratio from the logistic regression including PCA covariates

`se`

standard error of the odds ratio

`pval`

asymptotic p-value

`info`

INFO score from imputation, ratio of variances can exceed 1

`ngt`

number of studies in which this SNP is directly genotyped (not imputed)

`CEUaf`

frequency of 'a1' in HapMap3 CEU (HapMap2 for BIP)

https://www.med.unc.edu/pgc/results-and-downloads

Psychiatric GWAS Consortium Bipolar Disorder Working Group, Large-scale genome-wide association analysis of bipolar disorder identifies a new susceptibility locus near ODZ4. Nature Genetics 43, 977 (2011). DOI: 10.1038/ng.943.

Other PGC datasets: `adhd`

, `aut`

,
`mdd`

, `scz`

Embedding an R snippet on your website

Add the following code to your website.

For more information on customizing the embed code, read Embedding Snippets.