covrunSummary: Reads a mod.df object created by 'readModDir' with ucov/tcov...
In ababaian/RRNAframework: R interface for RNAframework
Description
Usage
Arguments
Value
Examples
Description
Reads a mod.df object created by readModDir with ucov/tcov for coverage run
Usage
1
covrunSummary(mod.row, threshold = 0, col.select = 8)
Arguments
threshold
The number of reads in coverage required for a run count to start
mod.df
A modification data.frame object
Value
The maximum length (nt) of consecutive bases with coverage greater then threshold
Examples
1
geneCov.wt <- geneCovRun( mod.df.wt1, theshold = 5 )
ababaian/RRNAframework documentation built on March 18, 2020, 1:29 a.m.
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Description Usage Arguments Value Examples
Description
Reads a mod.df object created by readModDir with ucov/tcov for coverage run
Usage
1 | covrunSummary(mod.row, threshold = 0, col.select = 8)
|
Arguments
threshold |
The number of reads in coverage required for a run count to start |
mod.df |
A modification data.frame object |
Value
The maximum length (nt) of consecutive bases with coverage greater then threshold
Examples
1 | geneCov.wt <- geneCovRun( mod.df.wt1, theshold = 5 )
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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