getResultsTable: Get results table from a study

In abbvie-external/OmicNavigator: Open-Source Software for 'Omic' Data Analysis and Visualization

Get results table from a study

Description

Get results table from a study

Usage

getResultsTable(
  study,
  modelID,
  testID,
  annotationID = NULL,
  termID = NULL,
  libraries = NULL
)

Arguments

study	An OmicNavigator study. Either an object of class onStudy, or the name of an installed study package.
modelID	Filter by modelID
testID	Filter by testID
annotationID	Filter by annotationID
termID	Filter by termID
libraries	The directories to search for installed study packages. If left as NULL (the default), then installed.packages will use the result of .libPaths.

Value

A data frame which includes the columns from the features table followed by the columns from the results table. All the columns from the features table will be character strings, even if the values appear numeric.

If the optional arguments annotationID and termID are provided, the table will be filtered to only include features in that annotation term.

abbvie-external/OmicNavigator documentation built on April 12, 2025, 12:07 a.m.