lane: lane from Bioconductor workflow RNAseq123

In abbvie-external/OmicNavigator: Open-Source Software for 'Omic' Data Analysis and Visualization

lane from Bioconductor workflow RNAseq123

Description

A subset of the object lane from Bioconductor workflow RNAseq123.

Usage

lane

Format

A factor with 3 levels:

L004

Sample sequenced on lane 4

L006

Sample sequenced on lane 6

L008

Sample sequenced on lane 8

Source

https://bioconductor.org/packages/release/workflows/vignettes/RNAseq123/inst/doc/limmaWorkflow.html

References

Law CW, Alhamdoosh M, Su S, Dong X, Tian L, Smyth GK, Ritchie ME. RNA-seq analysis is easy as 1-2-3 with limma, Glimma and edgeR version 3; peer review: 3 approved. F1000Research 2018, 5:1408 \Sexpr[results=rd]{tools:::Rd_expr_doi("10.12688/f1000research.9005.3")}

Sheridan, J.M., Ritchie, M.E., Best, S.A. et al. A pooled shRNA screen for regulators of primary mammary stem and progenitor cells identifies roles for Asap1 and Prox1. BMC Cancer 2015, 15:221 \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1186/s12885-015-1187-z")}

Examples

  table(lane)
  str(lane)

abbvie-external/OmicNavigator documentation built on April 12, 2025, 12:07 a.m.