Files in acidgenomics/AcidGenomes
Acid Genomics Genome Annotations

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DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/AllClasses.R R/AllGenerics.R R/AllGlobals.R R/Ensembl2Entrez-methods.R R/EntrezGeneInfo.R R/Gene2Symbol-methods.R R/HGNC.R R/HGNC2Ensembl.R R/MGI2Ensembl.R R/Tx2Gene-methods.R R/currentGenomeBuild.R R/currentGenomeVersion.R R/detectOrganism.R R/downloadEnsemblGenome.R R/downloadGencodeGenome.R R/downloadRefSeqGenome.R R/downloadUCSCGenome.R R/emptyRanges.R R/export-methods.R R/geneSynonyms.R R/getEnsDb.R R/getGFFDirectives.R R/getGFFMetadata.R R/importTx2Gene.R R/internal-AnnotationHub.R R/internal-BiocFileCache.R R/internal-GRanges.R R/internal-GenomeInfoDb.R R/internal-NCBI.R R/internal-checksums.R R/internal-rtracklayer.R R/internal.R R/makeEnsDbFromGFF.R R/makeGRangesFromEnsembl.R R/makeGRangesFromGFF.R R/makeGRangesFromTxDb.R R/makeGene2Symbol.R R/makeProtein2Gene.R R/makeTx2Gene.R R/makeTx2GeneFromFASTA.R R/makeTxDbFromGFF.R R/mapEnsemblReleaseToURL.R R/mapHumanOrthologs.R R/organism-methods.R R/package.R R/reexports.R R/stripGeneVersions-methods.R R/stripTranscriptVersions-methods.R R/summary-methods.R README.md
_pkgdown.yml
inst/extdata/detect-organism.R
inst/extdata/detect-organism.csv
inst/extdata/detect-organism.rds
man/AcidGenomes-package.Rd man/AcidGenomesTestsURL.Rd man/Ensembl2Entrez-class.Rd man/Ensembl2Entrez.Rd man/EnsemblGenes-class.Rd man/EnsemblTranscripts-class.Rd man/Entrez2Ensembl-class.Rd man/EntrezGeneInfo-class.Rd man/EntrezGeneInfo.Rd man/FlyBaseGenes-class.Rd man/FlyBaseTranscripts-class.Rd man/GencodeGenes-class.Rd man/GencodeTranscripts-class.Rd man/Gene2Symbol-class.Rd man/Gene2Symbol.Rd man/HGNC-class.Rd man/HGNC.Rd man/HGNC2Ensembl-class.Rd man/HGNC2Ensembl.Rd man/MGI2Ensembl-class.Rd man/MGI2Ensembl.Rd man/Protein2Gene-class.Rd man/RefSeqGenes-class.Rd man/RefSeqTranscripts-class.Rd man/Tx2Gene-class.Rd man/Tx2Gene.Rd man/UCSCGenes-class.Rd man/UCSCTranscripts-class.Rd man/WormBaseGenes-class.Rd man/WormBaseTranscripts-class.Rd man/currentGenomeBuild.Rd man/currentGenomeVersion.Rd man/detectOrganism.Rd man/downloadEnsemblGenome.Rd man/downloadGencodeGenome.Rd man/downloadRefSeqGenome.Rd man/downloadUCSCGenome.Rd man/emptyRanges.Rd man/export.Rd man/geneSynonyms.Rd man/getEnsDb.Rd man/getGFFDirectives.Rd man/getGFFMetadata.Rd man/importTx2Gene.Rd man/makeEnsDbFromGFF.Rd man/makeGRangesFromEnsembl.Rd man/makeGRangesFromGFF.Rd man/makeGRangesFromTxDb.Rd man/makeGene2Symbol.Rd man/makeProtein2Gene.Rd man/makeTx2Gene.Rd man/makeTx2GeneFromFASTA.Rd man/makeTxDbFromGFF.Rd man/mapEnsemblReleaseToURL.Rd man/mapHumanOrthologs.Rd man/organism.Rd man/params.Rd man/reexports.Rd man/stripGeneVersions.Rd man/stripTranscriptVersions.Rd man/summary.Rd
pkgdown/extra.css
r-acidgenomes.Rproj
tests/testthat.R tests/testthat/helper-cache.R tests/testthat/helper-globals.R tests/testthat/test-Ensembl2Entrez.R tests/testthat/test-Gene2Symbol.R tests/testthat/test-HGNC2Ensembl.R tests/testthat/test-MGI2Ensembl.R tests/testthat/test-Tx2Gene.R tests/testthat/test-annotable.R tests/testthat/test-detectOrganism.R tests/testthat/test-downloadGenome.R tests/testthat/test-emptyRanges.R tests/testthat/test-export.R tests/testthat/test-geneSynonyms.R tests/testthat/test-importTx2Gene.R tests/testthat/test-makeGRangesFromEnsDb.R tests/testthat/test-makeGRangesFromEnsembl.R tests/testthat/test-makeGRangesFromGFF.R tests/testthat/test-makeGene2Symbol.R tests/testthat/test-makeTx2Gene.R tests/testthat/test-mapEnsemblReleaseToURL.R tests/testthat/test-mapHumanOrthologs.R tests/testthat/test-organism.R
todo.org
acidgenomics/AcidGenomes documentation built on Sept. 16, 2021, 7:30 p.m.