Files in acidgenomics/r-acidsinglecell

Acid Genomics Single Cell Experiment

NEWS.md R/AllClasses.R R/AllGenerics.R R/AllGlobals.R R/CellCycleMarkers.R R/CellTypeMarkers.R R/aggregate-methods.R R/aggregateCellsToSamples-methods.R R/barcodeRanksPerSample-methods.R R/cellCountsPerCluster-methods.R R/cellToSample-methods.R R/cellTypesPerCluster-methods.R R/clusters-methods.R R/combine-methods.R R/convertSampleIdsToNames-methods.R R/cpm-methods.R R/data.R R/diffExp-methods.R R/diffExpPerCluster-methods.R R/export-methods.R R/filterCells-methods.R R/findMarkers-methods.R R/geometricMean-methods.R R/indropsSampleIndexCounts.R R/internal-groups.R R/internal-markers.R R/makeSingleCellExperiment.R R/mapCellsToSamples.R R/melt-methods.R R/metrics-methods.R R/normalize-methods.R R/package.R R/sampleData-methods.R R/selectSamples-methods.R R/show-methods.R R/subsetPerSample-methods.R R/topCellsPerSample-methods.R R/zerosVsDepth-methods.R README.md man/AcidSingleCell-package.Rd man/AcidSingleCellTestsUrl.Rd man/CellCycleMarkers-class.Rd man/CellCycleMarkers.Rd man/CellTypeMarkers-class.Rd man/CellTypeMarkers.Rd man/KnownMarkers-class.Rd man/aggregate.Rd man/aggregateCellsToSamples.Rd man/barcodeRanksPerSample.Rd man/cellCountsPerCluster.Rd man/cellCycleMarkersList.Rd man/cellToSample.Rd man/cellTypeMarkersList.Rd man/cellTypesPerCluster.Rd man/clusters.Rd man/combine.Rd man/convertSampleIdsToNames.Rd man/cpm.Rd man/diffExp.Rd man/diffExpPerCluster.Rd man/export.Rd man/filterCells.Rd man/findMarkers.Rd man/geometricMean.Rd man/indropsSampleIndexCounts.Rd man/makeSingleCellExperiment.Rd man/mapCellsToSamples.Rd man/melt.Rd man/metrics.Rd man/normalize.Rd man/sampleData.Rd man/selectSamples.Rd man/show.Rd man/subsetPerSample.Rd man/topCellsPerSample.Rd man/zerosVsDepth.Rd tests/testthat.R tests/testthat/helper-cache.R tests/testthat/helper-globals.R tests/testthat/test-CellCycleMarkers.R tests/testthat/test-CellTypeMarkers.R tests/testthat/test-aggregate.R tests/testthat/test-cellToSample.R tests/testthat/test-cellTypesPerCluster.R tests/testthat/test-combine.R tests/testthat/test-convertSampleIdsToNames.R tests/testthat/test-diffExp.R tests/testthat/test-export.R tests/testthat/test-filterCells.R tests/testthat/test-makeSingleCellExperiment.R tests/testthat/test-mapCellsToSamples.R tests/testthat/test-melt.R tests/testthat/test-metrics.R tests/testthat/test-metricsPerSample.R tests/testthat/test-normalize.R tests/testthat/test-sampleData.R tests/testthat/test-sampleNames.R tests/testthat/test-selectSamples.R tests/testthat/test-subsetPerSample.R tests/testthat/test-topCellsPerSample.R tests/testthat/test-zerosVsDepth.R