barcodeRanksPerSample: Barcode ranks per sample

In acidgenomics/r-acidsinglecell: Acid Genomics Single Cell Experiment

Barcode ranks per sample

Description

Barcode ranks per sample

Usage

barcodeRanksPerSample(object, ...)

## S4 method for signature 'SingleCellExperiment'
barcodeRanksPerSample(object, assay = 1L, ...)

Arguments

object	Object.
assay	vector(1). Assay name or index position.
...	Passthrough arguments to DropletUtils::barcodeRanks().

Value

DataFrameList.

Note

Requires DropletUtils package to be installed.

Updated 2022-03-02.

See Also

• DropletUtils::barcodeRanks().

Examples

data(SingleCellExperiment_splatter, package = "AcidTest")

## SingleCellExperiment ====
if (requireNamespace("DropletUtils", quietly = TRUE)) {
    object <- SingleCellExperiment_splatter
    x <- barcodeRanksPerSample(object)
    names(x)
}

acidgenomics/r-acidsinglecell documentation built on March 30, 2024, 5:39 a.m.