API for adele/FamilyBasedPGMs
Methods for Learning Genetic and Environmental Graphical Models from Family Data

Global functions
adjustPValuesMatrix Source code
adjustSymmetricPValuesMatrix Source code
calculateBlockDiagonal2PhiMatrix Man page Source code
checkUnconfoundedEstimatesList Source code
computeFC Source code
computeSinglePhenotype Source code
convertInvCovToPCor Source code
familyBasedCITest Man page Source code
familyBasedPCorTest Source code
fixNonPositiveDefiniteMatrix Source code
fixNonPositiveDefiniteMatrixIter Source code
generateFamilyDAG Source code
generateFamilyDependentFCI_SEM Source code
generateFamilyDependentSEM Source code
getAdjMatrixFromSymmetricPCor Source code
getAdjMatrixFromSymmetricPCorPvalues Source code
getFCIScenarioParameters Source code
getFamilyBasedPCorResults Source code
getKinshipList Source code
getNClosestPoints Source code
getPCorInfo Source code
getPartialCorrelationMatrix Source code
getPartialCorrelationMatrixFromInvCov Source code
getRetVec Source code
getScenarioParameters Source code
getScenarioParametersFromList Source code
getStableEstimateIdx Source code
getUnconfoundedEstimates Source code
getUndirectedGraphFromCov Source code
getUndirectedGraphFromPCor Source code
getUndirectedGraphFromPCorPvalues Source code
intervalPercentage Source code
isPcorInfoComplete Source code
learnFamilyBasedDAGs Man page Source code
learnFamilyBasedUDGs Man page Source code
matrixSqrt Source code
mymcrotate Source code
mypmax Source code
mypmin Source code
plotFamilyPedigree Man page Source code
preprocessFamilyBasedDAGs Source code
preprocessFamilyBasedUDGs Source code
printEdgeList Source code
saveEdgeResultsPlot Source code
scen1 Man page
scen2 Man page
scen3 Man page
scen4 Man page
scen5 Man page
selectBestResult Source code
selectBestUDGPCorMatrices Source code
selectFamilyBasedPCor Source code
simulatePedigree Source code
simulatePedigrees Man page Source code
symmetrizeMatrix Source code
updatePreprocessedPvaluesTable Source code
adele/FamilyBasedPGMs documentation built on Dec. 27, 2019, 4:35 a.m.