API for adimitromanolakis/sim1000G
Genotype Simulations for Rare or Common Variants Using Haplotypes from 1000 Genomes

Global functions
SIM Man page
addIndividualFromGenotypes Source code
addUnrelatedIndividual Source code
addUnrelatedIndividualWithHaplotype Source code
computePairIBD1 Man page Source code
computePairIBD12 Man page Source code
computePairIBD2 Man page Source code
createVCF Man page Source code
crossoverCDFvector Man page
downloadGeneticMap Man page Source code
fgammamod Source code
fstar Source code
generateFakeWholeGenomeGeneticMap Man page Source code
generateNewHaplotypes Source code
generateRecombinationDistances Man page Source code
generateRecombinationDistances_noInterference Man page Source code
generateSingleRecombinationVector Man page Source code
generateUniformGeneticMap Man page Source code
generateUnrelatedIndividuals Man page Source code
geneticMap Man page
getCMfromBP Man page Source code
haplosim2 Source code
loadSimulation Man page Source code
makeCDF Source code
mate Source code
newFamily3generations Man page Source code
newFamilyWithOffspring Man page Source code
newNuclearFamily Man page Source code
plotRegionalGeneticMap Man page Source code
printMatrix Man page Source code
readGeneticMap Man page Source code
readGeneticMapFromFile Man page Source code
readVCF Man page Source code
refreshPool Source code
reset Source code
retrieveGenotypes Man page Source code
saveSimulation Man page Source code
sim1000G Man page
sim1000G-package Man page
startSimulation Man page Source code
subsetVCF Man page Source code
writePED Man page Source code
adimitromanolakis/sim1000G documentation built on Dec. 13, 2017, 10:58 a.m.