align.local.all: All local alignments
In adriaalcala/AligNet: Tool to Analyze PPI Networks and Align Networks using AligNet Algorithm algorithm
Description
Usage
Arguments
Value
Description
Compute a list of local alignments between clust1 and
clust2. The function compute all the local alignments of all pairs
of clusters whose centers have a similarity greather than ll
Usage
1
align.local.all(clust1, clust2, mat, threshold, cores = 2, dismat = NULL)
Arguments
clust1
a list of clusters
clust2
a list of clusters
mat
a similarity matrix
threshold
a threshold
cores
number of cores
dismat
a disimilarity matrix to use in the local aligments
Value
a list of alignments
adriaalcala/AligNet documentation built on May 10, 2019, 5:59 a.m.
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Description Usage Arguments Value
Description
Compute a list of local alignments between clust1 and
clust2. The function compute all the local alignments of all pairs
of clusters whose centers have a similarity greather than ll
Usage
1 | align.local.all(clust1, clust2, mat, threshold, cores = 2, dismat = NULL)
|
Arguments
clust1 |
a list of clusters |
clust2 |
a list of clusters |
mat |
a similarity matrix |
threshold |
a threshold |
cores |
number of cores |
dismat |
a disimilarity matrix to use in the local aligments |
Value
a list of alignments
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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