Files in adriaalcala/AligNet
Tool to Analyze PPI Networks and Align Networks using AligNet Algorithm algorithm
.Rbuildignore
.gitignore
.travis.yml
.travis.yml~
AligNet.Rproj
DESCRIPTION
NAMESPACE
R/Alin.R
R/Analysis.R
R/Data.R
R/sysdata.rda
data/Sim.RData
data/Sim1.RData
data/Sim2.RData
data/datalist
data/datalist~
data/dme-dme.RData
data/dme-sce.RData
data/dme.RData
data/go.rda
data/net1.txt
data/net2.txt
data/sce-sce.RData
data/sce.RData
man/EC.score.Rd
man/EC.score.all.Rd
man/FC.score.Rd
man/HungarianFinal.Rd
man/Sim.Rd
man/Sim1.Rd
man/Sim2.Rd
man/align.end.Rd
man/align.global.Rd
man/align.local.Rd
man/align.local.all.Rd
man/align.local.plot.Rd
man/align.plot.Rd
man/aligns.update.Rd
man/alin_aux.Rd
man/buildBlast.Rd
man/cluster.network.Rd
man/compute.matrix.Blast.Rd
man/compute.matrix.DSD.Rd
man/compute.matrix.Degree.Rd
man/compute.matrix.Distance.Rd
man/compute.matrix.FC.Rd
man/compute.matrix.Rd
man/compute.score.Rd
man/computeIC.Rd
man/cont.type.Rd
man/display.clusters.Rd
man/dme-dme.Rd
man/dme-sce.Rd
man/dme.Rd
man/extract.clusters.Rd
man/get.aligns.Rd
man/go.Rd
man/hypergraph.solve.Rd
man/internal.Rd
man/is.element2.Rd
man/matrix.update.Rd
man/net1.Rd
man/net2.Rd
man/read.matrix.RData.Rd
man/read.matrix.Rd
man/read.matrix.col3.Rd
man/read.matrix.table.Rd
man/read.network.Rd
man/read.network.edges.Rd
man/read.network.tab.Rd
man/remove.global.Rd
man/sce-sce.Rd
man/sce.Rd
man/search.aligns.Rd
man/select.aligns.Rd
man/sim.score.Rd
man/sim.score.all.Rd
man/size.score.all.Rd
man/splitBIOGRID.Rd
man/splitDIP.Rd
man/splitgene.Rd
man/splitrefseq.Rd
man/splituniprot.Rd
vignettes/HowTo.Rmd
vignettes/HowTo.html
vignettes/HowTo.md
vignettes/dme-sce.Rmd
