Facilitate the description, transformation, exploration, and reproducibility of metabarcoding analyses. 'MiscMetabar' is mainly built on top of the 'phyloseq', 'dada2' and 'targets' R packages. It helps to build reproducible and robust bioinformatics pipelines in R. 'MiscMetabar' makes ecological analysis of alpha and beta-diversity easier, more reproducible and more powerful by integrating a large number of tools. Important features are described in Taudière A. (2023) <doi:10.21105/joss.06038>.
Package details |
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Bioconductor views | Classification Clustering Metagenomics Microbiome Sequencing Visualization |
Maintainer | |
License | AGPL-3 |
Version | 0.10.2 |
URL | https://github.com/adrientaudiere/MiscMetabar https://adrientaudiere.github.io/MiscMetabar/ |
Package repository | View on GitHub |
Installation |
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