net13Jun12: PPI network from Pathway Commons v1

net13Jun12R Documentation

PPI network from Pathway Commons v1


Adjacency matrix describing a curated PPI network derived from Pathway Commons on the 13th Jun 2012, containing over 8000 proteins. Proteins have been annotated to the genes (Entrez gene ID) they encode. Diagonal entries are 0. Other entries are zero or 1 if an interaction has been reported. Please see references for detailed construction of the PPI network.




Adjacency matrix for the PPI network


Upon loading the data object, we find the following:

  • net13Jun12.m: the adjacency matrix


Teschendorff AE, Enver T. Single-cell entropy for accurate estimation of differentiation potency from a cell’s transcriptome. Nat.Commun.2017

aet21/SCENT documentation built on Aug. 1, 2022, 12:05 p.m.