net17Jan16: PPI network from Pathway Commons-v2
In aet21/SCENT: Single Cell Entropy
net17Jan16 R Documentation
PPI network from Pathway Commons-v2
Description
Adjacency matrix describing a curated PPI network derived from Pathway
Commons on the 17th Jan 2016, containing over 10000 proteins. Proteins
have been annotated to the genes (Entrez gene ID) they encode. Diagonal
entries are 0. Other entries are zero or 1 if an interaction has been
reported. Please see references for detailed construction of the PPI network.
Usage
data(net17Jan16)
Format
Adjacency matrix for the PPI network
Details
Upon loading the data object, we find the following:
-
net17Jan16.m: the adjacency matrix
References
Teschendorff AE, Enver T. Single-cell entropy for accurate estimation of
differentiation potency from a cell’s transcriptome. Nat.Commun.2017
aet21/SCENT documentation built on Aug. 1, 2022, 12:05 p.m.
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| net17Jan16 | R Documentation |
PPI network from Pathway Commons-v2
Description
Adjacency matrix describing a curated PPI network derived from Pathway Commons on the 17th Jan 2016, containing over 10000 proteins. Proteins have been annotated to the genes (Entrez gene ID) they encode. Diagonal entries are 0. Other entries are zero or 1 if an interaction has been reported. Please see references for detailed construction of the PPI network.
Usage
data(net17Jan16)
Format
Adjacency matrix for the PPI network
Details
Upon loading the data object, we find the following:
-
net17Jan16.m: the adjacency matrix
References
Teschendorff AE, Enver T. Single-cell entropy for accurate estimation of differentiation potency from a cell’s transcriptome. Nat.Commun.2017
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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