RACE Groundfish Assessment Program EBS and NBS temperature products

.Rbuildignore

.github/workflows/secretScan.yml

.gitignore

0_update_cold_pool_index.Rmd 2022_cold_pool_index.Rmd

2022_cold_pool_index.docx

2022_cold_pool_index_esr.docx

2023_cold_pool_index.Rmd Compare_interpolation_methods.Rmd

DESCRIPTION

LICENSE.md

NAMESPACE

NEWS

R/compare_cpa_station_filter.R R/cpa_from_raster.R R/data.R R/data2raster.R R/estimate_anisotropy.R R/estimate_z_expansion.R R/figs.R R/get_data.R R/interpolate_variable.R R/interpolation_wrapper.R R/kriging_cv.R R/loocv_2.R R/loocv_gear_temp.R R/make_loocv_summary.R R/make_rank_table.R R/make_tm_product_figs.R R/make_var_by_method.R R/plot_loocv_rmse.R

R/sysdata.rda

R/utils.R README.md analysis/cold_pool_for_regional_models.Rmd

analysis/cold_pool_for_regional_models.html

coldpool_refs.bib

data/ebs_nbs_temperature_full_area.csv

data/index_hauls_temperature_data.csv

data/survey_replicates_B10K-K20_CORECFS.csv

data/temperature.nc

fish-and-fisheries.csl

inst/CITATION

inst/extdata/B10K_lte200m_polygon.dbf

inst/extdata/B10K_lte200m_polygon.shp

inst/extdata/B10K_lte200m_polygon.shx

inst/extdata/cpa_areas2019.csv

inst/extdata/old_method_cpa_temperature_2021.csv

inst/sql/ebs_gear_temperature_all_hauls.sql

inst/sql/ebs_gear_temperature_all_hauls_current_year.sql

inst/sql/ebs_gear_temperature_cold_pool_hauls.sql

inst/sql/ebs_gear_temperature_cold_pool_hauls_current_year.sql

man/calcindices_temp.Rd man/cold_pool_index.Rd man/convert_ddm_to_dd.Rd man/cpa_from_raster.Rd man/cpa_pre2021.Rd man/data2raster.Rd man/ebs_bottom_temperature.Rd man/ebs_proj_crs.Rd man/ebs_surface_temperature.Rd man/estimate_anisotropy.Rd man/estimate_z_expansion.Rd man/get_connected.Rd man/get_data.Rd man/interpolate_variable.Rd man/interpolation_wrapper.Rd man/kriging_cv.Rd man/legend_discrete_cbar.Rd man/loocv_gear_temp.Rd man/make_raster_file.Rd man/make_raster_stack.Rd man/nbs_ebs_bottom_temperature.Rd man/nbs_ebs_surface_temperature.Rd man/nbs_mean_temperature.Rd man/parseregion.Rd man/plot_loocv_rmse.Rd man/scale_fill_fermenter_custom.Rd man/sql_to_rqry.Rd man/theme_multi_map.Rd man/theme_multi_map_blue_strip.Rd man/theme_tm_no_legend.Rd

plots/2021/2021_anomaly.png

plots/2021/2021_average_temperature.png

plots/2021/2021_cold_pool_index.png

plots/2021/2021_coldpool.png

plots/2021/2021_coldpool_with_area.png

plots/2021/2021_nbs_ebs_temperature_contour_map.png

plots/2021/2021_nbs_ebs_temperature_map.png

plots/2021/2021_plot_sebs_average_temperature.png

plots/2021/2021_stacked_temperature_simple_label.png

plots/2022/2022_anomaly.png

plots/2022/2022_average_temperature.png

plots/2022/2022_cold_pool_index.png

plots/2022/2022_coldpool.png

plots/2022/2022_coldpool_with_area.png

plots/2022/2022_nbs_ebs_sst_map_grid.png

plots/2022/2022_nbs_ebs_temperature_contour_map.png

plots/2022/2022_nbs_ebs_temperature_map.png

plots/2022/2022_nbs_ebs_temperature_map_grid.png

plots/2022/2022_plot_sebs_average_temperature.png

plots/2022/2022_stacked_temperature.png

plots/2022/2022_stacked_temperature_simple_label.png

plots/2022/2023_cold_pool_index.png

plots/2022/annual_bt/1982_ebs_bt_map.png

plots/2022/annual_bt/1983_ebs_bt_map.png

plots/2022/annual_bt/1984_ebs_bt_map.png

plots/2022/annual_bt/1985_ebs_bt_map.png

plots/2022/annual_bt/1986_ebs_bt_map.png

plots/2022/annual_bt/1987_ebs_bt_map.png

plots/2022/annual_bt/1988_ebs_bt_map.png

plots/2022/annual_bt/1989_ebs_bt_map.png

plots/2022/annual_bt/1990_ebs_bt_map.png

plots/2022/annual_bt/1991_ebs_bt_map.png

plots/2022/annual_bt/1992_ebs_bt_map.png

plots/2022/annual_bt/1993_ebs_bt_map.png

plots/2022/annual_bt/1994_ebs_bt_map.png

plots/2022/annual_bt/1995_ebs_bt_map.png

plots/2022/annual_bt/1996_ebs_bt_map.png

plots/2022/annual_bt/1997_ebs_bt_map.png

plots/2022/annual_bt/1998_ebs_bt_map.png

plots/2022/annual_bt/1999_ebs_bt_map.png

plots/2022/annual_bt/2000_ebs_bt_map.png

plots/2022/annual_bt/2001_ebs_bt_map.png

plots/2022/annual_bt/2002_ebs_bt_map.png

plots/2022/annual_bt/2003_ebs_bt_map.png

plots/2022/annual_bt/2004_ebs_bt_map.png

plots/2022/annual_bt/2005_ebs_bt_map.png

plots/2022/annual_bt/2006_ebs_bt_map.png

plots/2022/annual_bt/2007_ebs_bt_map.png

plots/2022/annual_bt/2008_ebs_bt_map.png

plots/2022/annual_bt/2009_ebs_bt_map.png

plots/2022/annual_bt/2010_ebs_bt_map.png

plots/2022/annual_bt/2011_ebs_bt_map.png

plots/2022/annual_bt/2012_ebs_bt_map.png

plots/2022/annual_bt/2013_ebs_bt_map.png

plots/2022/annual_bt/2014_ebs_bt_map.png

plots/2022/annual_bt/2015_ebs_bt_map.png

plots/2022/annual_bt/2016_ebs_bt_map.png

plots/2022/annual_bt/2017_ebs_bt_map.png

plots/2022/annual_bt/2018_ebs_bt_map.png

plots/2022/annual_bt/2019_ebs_bt_map.png

plots/2022/annual_bt/2021_ebs_bt_map.png

plots/2022/annual_bt/2022_ebs_bt_map.png

plots/2023_anomaly.png

plots/2023_average_temperature.png

plots/2023_cold_pool_index.png

plots/2023_coldpool.png

plots/2023_coldpool_with_area.png

plots/2023_nbs_ebs_sst_map_grid.png

plots/2023_nbs_ebs_temperature_map.png

plots/2023_nbs_ebs_temperature_map_grid.png

plots/2023_plot_sebs_average_temperature.png

plots/2023_stacked_temperature.png

plots/2023_stacked_temperature_simple_label.png

plots/analysis_figs/MEAN_BT_LT100M_strata.png

plots/analysis_figs/RSPE_violin_GEAR_TEMPERATURE_1.png

plots/analysis_figs/RSPE_violin_GEAR_TEMPERATURE_2.png

plots/analysis_figs/RSPE_violin_GEAR_TEMPERATURE_3.png

plots/analysis_figs/RSPE_violin_GEAR_TEMPERATURE_4.png

plots/analysis_figs/RSPE_violin_GEAR_TEMPERATURE_5.png

plots/analysis_figs/RSPE_violin_surface_temperature_1.png

plots/analysis_figs/RSPE_violin_surface_temperature_2.png

plots/analysis_figs/RSPE_violin_surface_temperature_3.png

plots/analysis_figs/RSPE_violin_surface_temperature_4.png

plots/analysis_figs/RSPE_violin_surface_temperature_5.png

plots/analysis_figs/bt_by_year.png

plots/analysis_figs/bt_by_year_methods_abs_diff.png

plots/analysis_figs/bt_by_year_methods_rel_diff.png

plots/analysis_figs/bt_methods_multipanel.png

plots/analysis_figs/cpa_by_year.png

plots/analysis_figs/cpa_by_year_methods_abs_diff.png

plots/analysis_figs/cpa_by_year_methods_rel_diff.png

plots/analysis_figs/cpa_methods_multipanel.png

plots/analysis_figs/doy_for_tm.png

plots/analysis_figs/mean_bottom_temp_lte100m_method_comp.png

plots/analysis_figs/sst_by_year.png

plots/analysis_figs/sst_by_year_methods_abs_diff.png

plots/analysis_figs/sst_by_year_methods_rel_diff.png

plots/analysis_figs/sst_methods_multipanel.png

plots/analysis_figs/tm_average_temperature.png

plots/analysis_figs/tm_coldpool_grid_1.png

plots/analysis_figs/tm_coldpool_grid_2.png

plots/analysis_figs/tm_nbs_ebs_temperature_contour_map.png

plots/analysis_figs/tm_nbs_ebs_temperature_map.png

plots/analysis_figs/tm_plot_sebs_average_temperature.png

plots/analysis_figs/tm_stacked_temperature.png

plots/annual_bt.zip

plots/annual_bt/1982_ebs_bt_map.png

plots/annual_bt/1983_ebs_bt_map.png

plots/annual_bt/1984_ebs_bt_map.png

plots/annual_bt/1985_ebs_bt_map.png

plots/annual_bt/1986_ebs_bt_map.png

plots/annual_bt/1987_ebs_bt_map.png

plots/annual_bt/1988_ebs_bt_map.png

plots/annual_bt/1989_ebs_bt_map.png

plots/annual_bt/1990_ebs_bt_map.png

plots/annual_bt/1991_ebs_bt_map.png

plots/annual_bt/1992_ebs_bt_map.png

plots/annual_bt/1993_ebs_bt_map.png

plots/annual_bt/1994_ebs_bt_map.png

plots/annual_bt/1995_ebs_bt_map.png

plots/annual_bt/1996_ebs_bt_map.png

plots/annual_bt/1997_ebs_bt_map.png

plots/annual_bt/1998_ebs_bt_map.png

plots/annual_bt/1999_ebs_bt_map.png

plots/annual_bt/2000_ebs_bt_map.png

plots/annual_bt/2001_ebs_bt_map.png

plots/annual_bt/2002_ebs_bt_map.png

plots/annual_bt/2003_ebs_bt_map.png

plots/annual_bt/2004_ebs_bt_map.png

plots/annual_bt/2005_ebs_bt_map.png

plots/annual_bt/2006_ebs_bt_map.png

plots/annual_bt/2007_ebs_bt_map.png

plots/annual_bt/2008_ebs_bt_map.png

plots/annual_bt/2009_ebs_bt_map.png

plots/annual_bt/2010_ebs_bt_map.png

plots/annual_bt/2011_ebs_bt_map.png

plots/annual_bt/2012_ebs_bt_map.png

plots/annual_bt/2013_ebs_bt_map.png

plots/annual_bt/2014_ebs_bt_map.png

plots/annual_bt/2015_ebs_bt_map.png

plots/annual_bt/2016_ebs_bt_map.png

plots/annual_bt/2017_ebs_bt_map.png

plots/annual_bt/2018_ebs_bt_map.png

plots/annual_bt/2019_ebs_bt_map.png

plots/annual_bt/2021_ebs_bt_map.png

plots/annual_bt/2022_ebs_bt_map.png

plots/annual_bt/2023_ebs_bt_map.png

plots/ebs_nbs_survey_area.png

afsc-gap-products/coldpool documentation built on Feb. 25, 2024, 9:44 p.m.

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afsc-gap-products/coldpool
AFSC/RACE Groundfish Assessment Program EBS and NBS temperature products

Files in afsc-gap-products/coldpool
AFSC/RACE Groundfish Assessment Program EBS and NBS temperature products

R Package Documentation

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afsc-gap-products/coldpool AFSC/RACE Groundfish Assessment Program EBS and NBS temperature products

Files in afsc-gap-products/coldpool AFSC/RACE Groundfish Assessment Program EBS and NBS temperature products

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We want your feedback!

afsc-gap-products/coldpool
AFSC/RACE Groundfish Assessment Program EBS and NBS temperature products

Files in afsc-gap-products/coldpool
AFSC/RACE Groundfish Assessment Program EBS and NBS temperature products