matchbed2annotation: matchbed2annotation
In aiminy/3UTR-Seq: An R package for processing and analyzing 3UTR,DOGs and 5UTR data
Description
Usage
Arguments
Examples
Description
matchbed2annotation
Usage
1
2
matchbed2annotation(input.bedfile.dir, annotation.bed.file, ld, rd,
output.matched.bed.file.dir)
Arguments
ld
upstream base
rd
downstream base
output.matched.bed.file.dir
Examples
1
2
3
4
5
6
7
8
9
res <- convertbam2bed(input.bamfile.dir,output.bedfile.dir)
input.bedfile.dir <- res$output.bedfile.dir
annotation.bed.file <- annotation.bed.file
ld <- ld
rd <- rd
output.matched.bed.file.dir <- output.matched.bed.file.dir
res <- matchbed2annotation(input.bedfile.dir,annotation.bed.file,
ld,rd,output.matched.bed.file.dir)
aiminy/3UTR-Seq documentation built on May 10, 2019, 7:36 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Examples
Description
matchbed2annotation
Usage
1 2 | matchbed2annotation(input.bedfile.dir, annotation.bed.file, ld, rd,
output.matched.bed.file.dir)
|
Arguments
ld |
upstream base |
rd |
downstream base |
output.matched.bed.file.dir |
Examples
1 2 3 4 5 6 7 8 9 | res <- convertbam2bed(input.bamfile.dir,output.bedfile.dir)
input.bedfile.dir <- res$output.bedfile.dir
annotation.bed.file <- annotation.bed.file
ld <- ld
rd <- rd
output.matched.bed.file.dir <- output.matched.bed.file.dir
res <- matchbed2annotation(input.bedfile.dir,annotation.bed.file,
ld,rd,output.matched.bed.file.dir)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.