norm_factors: Title

In aiminy/3UTR-Seq: An R package for processing and analyzing 3UTR,DOGs and 5UTR data

Description

Title

Usage

norm_factors(mat)

Arguments

mat

Examples

raw.count<-re.rMAT.com.total$DE[,10:17]

raw.count.dds<-counts(re.rMAT.com.total.test.2$dds)

raw.count.DE<-re.rMAT.com.total.test.2$DE[,c(1,10:17)]

raw.count.DE.2<-raw.count.DE[match(rownames(raw.count.dds),raw.count.DE$tx_name),]

head(raw.count.DE.2)

raw.count.2<-apply(raw.count,2,as.numeric)

head(raw.count)


nor.fac<-norm_factors(raw.count.2)

estimateSizeFactorsForMatrix(raw.count.2)

aiminy/3UTR-Seq documentation built on May 10, 2019, 7:36 a.m.