mkdocs/src/featuredArticles.md
In aiminy/ModifiedclusterProfiler: statistical analysis and visualization of functional profiles for genes and gene clusters
Let us know if you have published using clusterProfiler and your publication will be featured here.
Find out more on google scholar.
2016
Classification and characterization of microsatellite instability across 18 cancer types. Nature Medicine. 2016.
Coordinate redeployment of PRC1 proteins suppresses tumor formation during Drosophila development. Nature Genetics. 2016.
Dpy30 is critical for maintaining the identity and function of adult hematopoietic stem cells. The Journal of Experimental Medicine. 2016.
Mining kidney toxicogenomic data by using gene co-expression modules. BMC Genomics. 2016, 17:790.
Local microRNA delivery targets Palladin and prevents metastatic breast cancer. Nature Communications. 2016, 7:12868
Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice. Nature Microbiology. 2016, 1:16140.
Comprehensive identification of internal structure and alternative splicing events in circular RNAs. Nature
Communications. 2016, 7:12060.
Age-related accrual of methylomic variability is linked to fundamental ageing mechanisms. Genome Biology. 2016, 17:191.
TP53 regulates miRNA association with AGO2 to remodel the miRNA–mRNA interaction network. Genome Research. 2016, 26:331-341.
ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization. Molecular BioSystems. 2016, 12(2):477-479.
2015
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparision and visualization. Bioinformatics. 2015, 31(14):2382-2383.
DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis. Bioinformatics. 2015, 31(4):608-609.
Aberrant DNA methylation in non-small cell lung cancer-associated fibroblasts. Carcinogenesis. 2015, 36(12):1453-1463.
A neural crest origin for cohesinopathy heart defects. Hum. Mol. Genet. 2015, 24(24): 7005-7016.
Genome-wide disruption of 5-hydroxymethylcytosine in a mouse model of autism. Hum. Mol. Genet. 2015, 24(24):7121-7131.
Correlation of clinical features and genetic profiles of stromal interaction molecule 1 (STIM1) in colorectal cancers. Oncotarget. 2015, 6(39):42169–42182.
2014
Age- and diet-associated metabolome remodeling characterizes the aging process driven by damage accumulation. eLife 2014,3:e02077
Expression Profiling of the Wheat Pathogen Zymoseptoria tritici Reveals Genomic Patterns of Transcription and Host-Specific Regulatory Programs. Genome Biol Evol 2014, 6(6): 1353-1365.
Proteomic analysis of putative heme-binding proteins in Streptococcus pyogenes. Metallomics 2014, 6:1451-1459
2013
Putative cobalt- and nickel-binding proteins and motifs in Streptococcus pneumoniae. Metallomics 2013,5:928-935.
A novel andrographolide derivative AL-1 exerts its cytotoxicity on K562 cells through a ROS-dependent mechanism. Proteomics 2013, 13(1):169–178.
aiminy/ModifiedclusterProfiler documentation built on May 10, 2019, 7:37 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Let us know if you have published using clusterProfiler and your publication will be featured here.
Find out more on google scholar.
2016
Classification and characterization of microsatellite instability across 18 cancer types. Nature Medicine. 2016.
Coordinate redeployment of PRC1 proteins suppresses tumor formation during Drosophila development. Nature Genetics. 2016.
Dpy30 is critical for maintaining the identity and function of adult hematopoietic stem cells. The Journal of Experimental Medicine. 2016.
Mining kidney toxicogenomic data by using gene co-expression modules. BMC Genomics. 2016, 17:790.
Local microRNA delivery targets Palladin and prevents metastatic breast cancer. Nature Communications. 2016, 7:12868
Antibiotic-mediated gut microbiome perturbation accelerates development of type 1 diabetes in mice. Nature Microbiology. 2016, 1:16140.
Comprehensive identification of internal structure and alternative splicing events in circular RNAs. Nature Communications. 2016, 7:12060.
Age-related accrual of methylomic variability is linked to fundamental ageing mechanisms. Genome Biology. 2016, 17:191.
TP53 regulates miRNA association with AGO2 to remodel the miRNA–mRNA interaction network. Genome Research. 2016, 26:331-341.
ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization. Molecular BioSystems. 2016, 12(2):477-479.
2015
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparision and visualization. Bioinformatics. 2015, 31(14):2382-2383.
DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis. Bioinformatics. 2015, 31(4):608-609.
Aberrant DNA methylation in non-small cell lung cancer-associated fibroblasts. Carcinogenesis. 2015, 36(12):1453-1463.
A neural crest origin for cohesinopathy heart defects. Hum. Mol. Genet. 2015, 24(24): 7005-7016.
Genome-wide disruption of 5-hydroxymethylcytosine in a mouse model of autism. Hum. Mol. Genet. 2015, 24(24):7121-7131.
Correlation of clinical features and genetic profiles of stromal interaction molecule 1 (STIM1) in colorectal cancers. Oncotarget. 2015, 6(39):42169–42182.
2014
Age- and diet-associated metabolome remodeling characterizes the aging process driven by damage accumulation. eLife 2014,3:e02077
Expression Profiling of the Wheat Pathogen Zymoseptoria tritici Reveals Genomic Patterns of Transcription and Host-Specific Regulatory Programs. Genome Biol Evol 2014, 6(6): 1353-1365.
Proteomic analysis of putative heme-binding proteins in Streptococcus pyogenes. Metallomics 2014, 6:1451-1459
2013
Putative cobalt- and nickel-binding proteins and motifs in Streptococcus pneumoniae. Metallomics 2013,5:928-935.
A novel andrographolide derivative AL-1 exerts its cytotoxicity on K562 cells through a ROS-dependent mechanism. Proteomics 2013, 13(1):169–178.
R Package Documentation
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