do.sdm: A main function to run the Species Distribution Model

In akeyel/behlpr: Functions to run my biodiversity analysis

Description

A main function to run the Species Distribution Model

Usage

do.sdm(sdm.data, my.index, col.index, sdm.type, colonization.only = 0)

Arguments

my.data
my.index	an index coding different column types. type 0 corresponds to the ID field type 1 corresponds to the species columns type 2+ correspond to different suites of independent variables
col.index	Contains indicators for whether or not to include the column as a predictor variable.
sdm.type	1 = basic sdm (nothing fancy), 2 = uses biomod
colonization.only	An indicator for whether to restrict the data set to only newly colonized plots #**# is this really a good idea? Seemed like one on the surface but not it seems stupid - you lose stable populations and parts of the core distribution. But you gain a weak attempt to look at dispersal limitation.

akeyel/behlpr documentation built on May 12, 2019, 4:41 a.m.