Reformats the matrix into a vector, and adds desired prefix information
| 1 | prep.output(in.spar.mat, change.count, sp, cell = "")
 | 
| in.spar.mat | in.spar.mat | 
| change.count | An indicator for the current environmental change step. | 
| sp | The species of interest (numeric) | 
| cell | A cell label | 
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