calculate_library_width: calculate_library_width
In alex-kalinka-cruk/crispRutils: Tools for working with CRISPR data.
Description
Usage
Arguments
Value
Author(s)
References
View source: R/calculate_library_width.R
Description
Calculates the library width of a plasmid sample, as defined in Imkeller et al. (2020) - 90th percentile divided by the 10th percentile.
Usage
1
calculate_library_width(counts)
Arguments
counts
A vector of integer counts.
Value
A numeric value.
Author(s)
Alex T. Kalinka alex.kalinka@cancer.org.uk
References
Imkeller, K. et al. 2020. gscreend: modelling asymmetric count ratios in CRISPR screens to decrease experiment size and improve phenotype detection. Genome Biol 21, 53.
alex-kalinka-cruk/crispRutils documentation built on March 13, 2021, 7:52 p.m.
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Description Usage Arguments Value Author(s) References
View source: R/calculate_library_width.R
Description
Calculates the library width of a plasmid sample, as defined in Imkeller et al. (2020) - 90th percentile divided by the 10th percentile.
Usage
1 | calculate_library_width(counts)
|
Arguments
counts |
A vector of integer counts. |
Value
A numeric value.
Author(s)
Alex T. Kalinka alex.kalinka@cancer.org.uk
References
Imkeller, K. et al. 2020. gscreend: modelling asymmetric count ratios in CRISPR screens to decrease experiment size and improve phenotype detection. Genome Biol 21, 53.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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