read_bagel_gene_results: read_bagel_gene_results
In alex-kalinka-cruk/crispRutils: Tools for working with CRISPR data.
Description
Usage
Arguments
Value
Author(s)
View source: R/read_bagel_gene_results.R
Description
Reads in all Bagel gene-level results ('*.bf') for a single screen put through the AZ-CRUK CRISPR pipeline.
Usage
1
read_bagel_gene_results(path, ess_thresh)
Arguments
path
A path to AZ-CRUK pipeline output for a single screen.
ess_thresh
One of 'orig', 'fgcQC' - indicating which essential gene sets are used for determining the Bagel threshold.
Value
An object of class 'bagel_gene'.
Author(s)
Alex T. Kalinka alex.kalinka@cancer.org.uk
alex-kalinka-cruk/crispRutils documentation built on March 13, 2021, 7:52 p.m.
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Description Usage Arguments Value Author(s)
View source: R/read_bagel_gene_results.R
Description
Reads in all Bagel gene-level results ('*.bf') for a single screen put through the AZ-CRUK CRISPR pipeline.
Usage
1 | read_bagel_gene_results(path, ess_thresh)
|
Arguments
path |
A path to AZ-CRUK pipeline output for a single screen. |
ess_thresh |
One of 'orig', 'fgcQC' - indicating which essential gene sets are used for determining the Bagel threshold. |
Value
An object of class 'bagel_gene'.
Author(s)
Alex T. Kalinka alex.kalinka@cancer.org.uk
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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