get_ncbi_taxonomy: Download NCBI taxdump
In alexpiper/taxreturn: An R package for retrieving and curating public DNA barcode reference data
View source: R/ncbi_taxonomy.R
get_ncbi_taxonomy R Documentation
Download NCBI taxdump
Description
Download NCBI taxdump
Usage
get_ncbi_taxonomy(dest_dir, include_synonyms = TRUE, force = FALSE)
Arguments
dest_dir
A directory to save the downloaded ncbi taxdump files. If empty a new folder in the working directory will be created
include_synonyms
Whether synonyms should be included in the database
force
Whether already downloaded files should be overwrittenget
alexpiper/taxreturn documentation built on Sept. 14, 2024, 7:56 p.m.
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View source: R/ncbi_taxonomy.R
| get_ncbi_taxonomy | R Documentation |
Download NCBI taxdump
Description
Download NCBI taxdump
Usage
get_ncbi_taxonomy(dest_dir, include_synonyms = TRUE, force = FALSE)
Arguments
dest_dir |
A directory to save the downloaded ncbi taxdump files. If empty a new folder in the working directory will be created |
include_synonyms |
Whether synonyms should be included in the database |
force |
Whether already downloaded files should be overwrittenget |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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