API for alexyermanos/Echidna
Single Cell Immune Repertoire and Transcriptome Simulation
| Global functions | |
|---|---|
| .ADD.BARCODE | Source code |
| .Arg_base | Source code |
| .Arg_onehot | Source code |
| .CELL.DIVISION.LINEAR | Source code |
| .CELL.DIVISION.LINEAR.INVERSE | Source code |
| .GENERATE.BARCODE | Source code |
| .GENERATE.COMBI | Source code |
| .RM.EMPTY.NODE | Source code |
| .SHM_FUNCTION_SEQUENCE4 | Source code |
| .TRANS.SWITCH | Source code |
| .TRANS.SWITCH.DEPENDANT | Source code |
| .VDJ_RECOMBIN_FUNCTION | Source code |
| .WRITE.CONSENSUS | Source code |
| .onehot_encoding | Source code |
| clonofreq | Man page Source code |
| clonofreq.isotype.data | Man page Source code |
| clonofreq.isotype.plot | Man page Source code |
| clonofreq.trans.data | Man page Source code |
| clonofreq.trans.plot | Man page Source code |
| cluster.id.igraph | Man page Source code |
| get.avr.mut.data | Man page Source code |
| get.avr.mut.plot | Man page Source code |
| get.barplot.errorbar | Man page Source code |
| get.elbow | Man page Source code |
| get.n.node.data | Man page Source code |
| get.n.node.plot | Man page Source code |
| get.seq.distance | Man page Source code |
| get.umap | Man page Source code |
| get.vgu.matrix | Man page Source code |
| no.empty.node | Man page Source code |
| select.top | Man page Source code |
| simulate_repertoire | Man page Source code |
| umap.top.highlight | Man page Source code |
| vae_generate | Man page Source code |
