get.umap: Further process the the seurat object from simulated...
In alexyermanos/Echidna: Single Cell Immune Repertoire and Transcriptome Simulation
View source: R/other_functions.R
Description
Further process the the seurat object from simulated transciptome output and make UMAP ready for plotting.
Usage
1
get.umap(gex, d, reso)
Arguments
gex
output from get.elbow function.
d
dims argurment of in Seurat::FindNeighbors() and Seurat::RunUMAP
reso
resolution argument in Seurat::FindClusters()
alexyermanos/Echidna documentation built on Feb. 13, 2022, 10:29 a.m.
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View source: R/other_functions.R
Description
Further process the the seurat object from simulated transciptome output and make UMAP ready for plotting.
Usage
1 | get.umap(gex, d, reso)
|
Arguments
gex |
output from get.elbow function. |
d |
dims argurment of in Seurat::FindNeighbors() and Seurat::RunUMAP |
reso |
resolution argument in Seurat::FindClusters() |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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