clonofreq.isotype.data: Get information about the clonotype counts grouped by...
In alexyermanos/Echidna: Single Cell Immune Repertoire and Transcriptome Simulation
View source: R/other_functions.R
Description
Return dataframes containing the top n abundant clonotypes and their frequency and isotype information for further processing.
Usage
1
clonofreq.isotype.data(all.contig.annotations, top.n)
Arguments
all.contig.annotations
The output dataframe all_contig_annotation from function simulate.repertoire.
top.n
The top n abundant clones to be shown in the plot. If missing, all clones will be shown.
alexyermanos/Echidna documentation built on Feb. 13, 2022, 10:29 a.m.
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View source: R/other_functions.R
Description
Return dataframes containing the top n abundant clonotypes and their frequency and isotype information for further processing.
Usage
1 | clonofreq.isotype.data(all.contig.annotations, top.n)
|
Arguments
all.contig.annotations |
The output dataframe all_contig_annotation from function simulate.repertoire. |
top.n |
The top n abundant clones to be shown in the plot. If missing, all clones will be shown. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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