Files in alrobles/PNASSubmit-Wildlife-susceptibility-to-infectious-diseases-at-global-scales
Set of tools for ecological interaction geospatial analysis
DESCRIPTION
LICENSE
NAMESPACE
PNAS.Rproj
R/acummulate_incidence.R
R/batscoronavirus.R
R/batsdistance.R
R/birdsdistance.R
R/birdsplasmodium.R
R/birdsplasmodiumrelictum.R
R/birdswnv.R
R/cummulative_rate.R
R/cutoff_incidence.R
R/foo.R
R/get_powerlaw.R
R/mammalsdistance.R
R/mammalvirus.R
R/prep_incidence_data.R
README.md
data-raw/MalAvi_7133898_coordinatesOK_ALN_Angel.xlsx
data-raw/Tolsa2018Birds-WNV.xls
data-raw/bat_coronavirus_DB.csv
data-raw/powerlaw.R
data/batscoronavirus.rda
data/batsdistance.rda
data/birdsdistance.rda
data/birdsplasmodium.rda
data/birdsplasmodiumrelictum.rda
data/birdswnv.rda
data/mammalsdistance.rda
data/mammalvirus.rda
man/acummulate_incidence.Rd
man/batscoronavirus.Rd
man/batsdistance.Rd
man/birdsdistance.Rd
man/birdsplasmodium.Rd
man/birdsplasmodiumrelictum.Rd
man/birdswnv.Rd
man/cummulative_rate.Rd
man/cutoff_incidence.Rd
man/get_powerlaw.Rd
man/mammalsdistance.Rd
man/mammalvirus.Rd
man/pipe.Rd
man/prep_incidence_data.Rd
scripts/01_powerlaw.R
scripts/02_birds_geo_distance.R
scripts/03_mammals_geo_distance.R
scripts/04_birds_env_distance.R
scripts/05_mammals_env_distance.R
scripts/06_birds_phy_distance.R
scripts/07_mammals_phy_distance.R
scripts/08_distance_dataFrames.R
scripts/09_bird_plasmodium_sims.R
scripts/10_bird_wnv_sims.R
scripts/11_bat_coronavirus_sims.R
scripts/12_top10_species_by_assemblage.R
scripts/13_environmental_envelopes.R
scripts/14_susceptibility_richness_birds_malaria.R
scripts/15_susceptibility_richness_birds_wnv.R
scripts/16_susceptibility_richness_bat_coronavirus.R
scripts/17_susceptibility_phylogenetic_reconstruction_bird_malaria.R
scripts/18_susceptibility_phylogenetic_reconstruction_bird_wnv.R
scripts/19_susceptibility_phylogenetic_reconstruction_bats_coronavirus.R
