sweetDplot: Plot Hoeffding's D statistic against the median for an...
In amberjoybarton/sweetD: Hoeffding's D Statistic as a Summary Statistic for MA Plots
Description
Usage
Arguments
Examples
Description
Generates a violin plot from the output of sweetDmedian to quickly visualise the distribution of D statistics.
Usage
1
sweetDplot(Dmedian_output)
Arguments
Dmedian_output
The output after having performed Dmedian() on one or more log transformed matrices, with columns corresponding to samples and rows to genes or other features.
Examples
1
2
3
data(expr.raw, expr.batchcorrected, expr.normalised)
DstatResults = sweetDmedian(expr.raw, expr.batchcorrected, expr.normalised)
sweetDplot(DstatResults)
amberjoybarton/sweetD documentation built on Feb. 27, 2021, 3:44 a.m.
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Description Usage Arguments Examples
Description
Generates a violin plot from the output of sweetDmedian to quickly visualise the distribution of D statistics.
Usage
1 | sweetDplot(Dmedian_output)
|
Arguments
Dmedian_output |
The output after having performed Dmedian() on one or more log transformed matrices, with columns corresponding to samples and rows to genes or other features. |
Examples
1 2 3 | data(expr.raw, expr.batchcorrected, expr.normalised)
DstatResults = sweetDmedian(expr.raw, expr.batchcorrected, expr.normalised)
sweetDplot(DstatResults)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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