Man pages for anasrana/spector
Computes a measure for the signal roughnes for genomic sequencing files

calc_gimGIM
full_genome_regionsCreate regularly spaced regions along the whole genome.
las_statusLas limits
pipePipe operator
read_bedRead bed bed_file with bed_regions to run spector
read_covRead the coverage for regions on one chromosome.
read_par_fileRead spector id file.
spectorspector: SEquence COverage Roughness
spector_qcCompute QC (spector LAS) for bam files.
spector_sampleGet path for samples provided in the spector package.
anasrana/spector documentation built on Jan. 24, 2018, 8:19 a.m.