read_chrom_size: Read genome chromosome sizes file
In andreaskapou/BPRMeth: Model higher-order methylation profiles
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
read_chrom_size reads a file containing genome chromosome
sizes using the fread function.
Usage
1
read_chrom_size(file, delimiter = "\t")
Arguments
file
File name
delimiter
Delimiter format the columns are splitted. Default is tab.
Value
A data.table object.
Author(s)
C.A.Kapourani C.A.Kapourani@ed.ac.uk
See Also
Examples
1
2
3
4
5
chr_file <- system.file("extdata", "hg19.chr.sizes", package = "BPRMeth")
chr_data <- read_chrom_size(chr_file)
# Extract the size of chr1
chr_data[1]
andreaskapou/BPRMeth documentation built on June 11, 2020, 10:49 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
read_chrom_size reads a file containing genome chromosome
sizes using the fread function.
Usage
1 | read_chrom_size(file, delimiter = "\t")
|
Arguments
file |
File name |
delimiter |
Delimiter format the columns are splitted. Default is tab. |
Value
A data.table object.
Author(s)
C.A.Kapourani C.A.Kapourani@ed.ac.uk
See Also
Examples
1 2 3 4 5 | chr_file <- system.file("extdata", "hg19.chr.sizes", package = "BPRMeth")
chr_data <- read_chrom_size(chr_file)
# Extract the size of chr1
chr_data[1]
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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