Files in andrew-edwards/EDMsimulate
Simulating Fish Populations for Empirical Dynamic Modeling
.Rbuildignore
.github/workflows/R-CMD-check.yaml
.github/workflows/test-coverage.yaml
.gitignore
DESCRIPTION
NAMESPACE
R/data.R
R/fit_models.R
R/forecast_errors.R
R/salmon_bif.R
R/salmon_sim.R
R/sim_and_fit.R
R/sim_and_fit_realisations.R
R/utils.R
README.md
data-raw/default_sim.R
data-raw/default_sim_seed_42_new.R
data-raw/three_sim_fits.R
data/default_sim.rda
data/default_sim_fit.rda
data/default_sim_fit_realisations.rda
data/default_sim_seed_42.rda
data/default_sim_seed_42_new.rda
data/default_sim_seed_42_new_fit.rda
data/three_sim_fits.rda
doc/salmon_sim.html
man/default_sim_seed_42.Rd
man/default_sim_seed_42_new.Rd
man/default_sim_seed_42_new_fit.Rd
man/fit_models.Rd
man/forecast_errors.Rd
man/plot_salmon_bif.Rd
man/plot_sim.Rd
man/salmon_bif.Rd
man/salmon_bif_run.Rd
man/salmon_run.Rd
man/salmon_sim.Rd
man/shift.Rd
man/sim_and_fit.Rd
man/sim_and_fit_realisations.Rd
man/three_sim_fits.Rd
report/Larkin-summary-stats_sd2021_feb.csv
report/analyse-simple-time-series.Rmd
report/gifski-test.Rmd
report/larkin-beta-pars.Rmd
report/larkin-compareMLE-Bayes.Rmd
report/larkin-estimation.Rmd
report/plotRealisations.Rmd
report/ppnErr.R
tests/testthat.R
tests/testthat/test-salmon_bif.R
tests/testthat/test-salmon_sim.R
tests/testthat/test-sim_and_fit.R
tests/testthat/test-sim_and_fit_realisations.R
tests/testthat/test-utils.R
vignettes/salmon_sim.Rmd
