plot_admixture: Make standard stacked-bars plot of ancestry proportions.
In andrewparkermorgan/popcorn: File-Format Wrangler for Population-Based Genetic Data
plot_admixture R Documentation
Make standard stacked-bars plot of ancestry proportions.
Description
Make standard stacked-bars plot of ancestry proportions.
Usage
plot_admixture(Q, label = FALSE, sort_order = NULL, pop_order = NULL, ...)
Arguments
Q
a matrix of admixture proportions, melted or not
label
show individual IDs along axis
sort_order
apply pre-determined sort order to individuals, eg. by cluster membership
pop_order
named vector to map arbitrary population labels ('pop1') onto meaningful ones
...
extra arguments, ignored
andrewparkermorgan/popcorn documentation built on July 8, 2023, 12:42 p.m.
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| plot_admixture | R Documentation |
Make standard stacked-bars plot of ancestry proportions.
Description
Make standard stacked-bars plot of ancestry proportions.
Usage
plot_admixture(Q, label = FALSE, sort_order = NULL, pop_order = NULL, ...)
Arguments
Q |
a matrix of admixture proportions, melted or not |
label |
show individual IDs along axis |
sort_order |
apply pre-determined sort order to individuals, eg. by cluster membership |
pop_order |
named vector to map arbitrary population labels ('pop1') onto meaningful ones |
... |
extra arguments, ignored |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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