PeakML.Methods.extractFileName: PeakML.Methods.extractFileName
In andzajan/mzmatch.R: mzmatch and PeakML integration for XCMS.
Description
Usage
Arguments
Details
Value
Author(s)
References
See Also
View source: R/PeakML.Methods.extractFileName.R
Description
Simple method to extract eaxct file name from the longer file path. Used to auto generate output file names.
Usage
1
PeakML.Methods.extractFileName (path)
Arguments
path
Full path to then input file.
Details
The PeakML file format defines an open and extensible file format for storing extracted hyphenated mass spectrometry
data. As such, the format will enable users to store intermediate data in a structured manner, but more importantly,
to exchange data between different data analysis software. This will give complete flexible control to the users of
data analysis software to cherry pick those components best suited to their needs.
The PeakML.Methods.getGroupAnnotations function allows to access attributes defined in PeakML file.
Value
Stripped file name which does not contains path to folders and subfolders.
Author(s)
Andris Jankevics (a.jankevics@rug.nl)
Richard Scheltema (r.a.scheltema@rug.nl)
References
PeakML/mzMatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis, Richard A. Scheltema, Andris Jankevics, Ritsert C. Jansen, Morris A. Swertz, Rainer Breitling, Analytical Chemistry, 2011 83 (7), 2786-2793.
See Also
andzajan/mzmatch.R documentation built on Dec. 1, 2020, 11:33 a.m.
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Description Usage Arguments Details Value Author(s) References See Also
View source: R/PeakML.Methods.extractFileName.R
Description
Simple method to extract eaxct file name from the longer file path. Used to auto generate output file names.
Usage
1 | PeakML.Methods.extractFileName (path)
|
Arguments
path |
Full path to then input file. |
Details
The PeakML file format defines an open and extensible file format for storing extracted hyphenated mass spectrometry data. As such, the format will enable users to store intermediate data in a structured manner, but more importantly, to exchange data between different data analysis software. This will give complete flexible control to the users of data analysis software to cherry pick those components best suited to their needs.
The PeakML.Methods.getGroupAnnotations function allows to access attributes defined in PeakML file.
Value
Stripped file name which does not contains path to folders and subfolders.
Author(s)
Andris Jankevics (a.jankevics@rug.nl) Richard Scheltema (r.a.scheltema@rug.nl)
References
PeakML/mzMatch: A File Format, Java Library, R Library, and Tool-Chain for Mass Spectrometry Data Analysis, Richard A. Scheltema, Andris Jankevics, Ritsert C. Jansen, Morris A. Swertz, Rainer Breitling, Analytical Chemistry, 2011 83 (7), 2786-2793.
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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