beta_boxplot: Within beta-diversity boxplot
In antonioggsousa/micrUBIfuns: Set of functions for microbiome analyses
Description
Usage
Arguments
Value
Description
Given a phyloseq object, a beta-diversity metric and a group/factorial variable
to group the samples, it calculates the within group beta-diversity.
Usage
1
beta_boxplot(physeq, method = "bray", group)
Arguments
physeq
phyloseq-class object.
method
beta-diversity metric. Default "bray", i.e., Bray-Curtis dissimilarity.
group
factorial variable to group.
Value
A list with the data frame and with the box plot of within group beta-diversity.
antonioggsousa/micrUBIfuns documentation built on Nov. 14, 2020, 1:40 a.m.
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Description Usage Arguments Value
Description
Given a phyloseq object, a beta-diversity metric and a group/factorial variable to group the samples, it calculates the within group beta-diversity.
Usage
1 | beta_boxplot(physeq, method = "bray", group)
|
Arguments
physeq |
phyloseq-class object. |
method |
beta-diversity metric. Default "bray", i.e., Bray-Curtis dissimilarity. |
group |
factorial variable to group. |
Value
A list with the data frame and with the box plot of within group beta-diversity.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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