Description Usage Arguments Value
Given a phyloseq object and a taxonomic rank (character) it gives the uniquess of features (OTUs/ASVs), i.e., the number of features (OTUs/ASVs) observed in one sample only.
1 | uni_taxa_rank(physeq, tax_rank)
|
physeq |
phyloseq-class object. |
tax_rank |
taxonomic rank (character). One of the taxonomic ranks among the column names of 'tax_table()' of the 'physeq' object given. |
A data frame with Taxa (lists the unique taxa that belongs to the 'tax_rank' provided), Unique_Taxa (no. of features - OTUs/ASVs - that appear only once, in one sample), Total_Taxa (no. of distinct features), Percentage_unique _Taxa (percentage of Unique_Taxa across the Total_Taxa).
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