lineage: Find the ancestors of a node

In arendsee/phylostratr: Analyze phylostratigraphic data

Find the ancestors of a node

Description

Find the ancestors of a node

Usage

lineage(x, ...)

## S3 method for class 'Strata'
lineage(x, id = x@focal_species, type = "name", use_name = TRUE, ...)

## S3 method for class 'phylo'
lineage(x, id, use_name = FALSE, type = "auto", ...)

## S3 method for class 'phylo'
tree_size(x)

Arguments

x	phylo object
...	Arguments passed on to lineage.phylo
id	A single name or index
type	id type: ['name', 'index', 'auto']
use_name	Should names be used rather than internal ids

Examples

data(atree)
lineage(atree, 't1')
lineage(atree, 1)

arendsee/phylostratr documentation built on Dec. 23, 2024, 1:31 p.m.