This package provides the analysis workflow for stoichiometry analysis of data from affinity purification experiments followed by mass spectrometry analysis (AP-MS). The package is an extention of the DEP package and it requires tabular input as generated by MaxQuant with iBAQ quantification enabled. Functions are provided for the analysis and visualization. For scientists with limited experience in R, the package also contains wrapper functions that entail the complete analysis workflow.
|Bioconductor views||DataRepresentation DifferentialExpression MassSpectrometry Proteomics|
|Package repository||View on GitHub|
Install the latest version of this package by entering the following in R:
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.