dot-getABMLE: Wrapper function to derive MLE estimates of a, b from...

In athchen/beer: Bayesian Enrichment Estimation in R

Wrapper function to derive MLE estimates of a, b from beads-only samples

Description

Wrapper function to derive MLE estimates of a, b from beads-only samples

Usage

.getABMLE(
  object,
  prop.offset = 1e-08,
  optim.method = "default",
  lower = 1,
  upper = Inf
)

Arguments

object	a PhIPData object
prop.offset	offset to use when the proportion of reads is 0.
optim.method	optimization method passed to [stats::optim].
lower	lower bound for the shape parameters.
upper	upper bound for the shape parameters.

Value

a data frame of MLE estimates of a, b

See Also

[stats::optim] for available optimization methods

athchen/beer documentation built on July 2, 2022, 10:35 p.m.