dot-guessEnrichedEdgeR: Guess super-enriched peptides based on edgeR fold-change...
In athchen/beer: Bayesian Enrichment Estimation in R
.guessEnrichedEdgeR R Documentation
Guess super-enriched peptides based on edgeR fold-change estimates
Description
Guess super-enriched peptides based on edgeR fold-change estimates
Usage
.guessEnrichedEdgeR(object, threshold = 15, fc.name = "logfc")
Arguments
object
PhIPData object.
threshold
minimum estimated fc for a peptide to be considered
super-enriched.
fc.name
assay name corresponding to the assay that stores the edgeR
estimated log2 fold-changes.
Value
logical matrix of the with the same dimensions as object
indicating which peptides are considered super-enriched.
athchen/beer documentation built on July 2, 2022, 10:35 p.m.
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| .guessEnrichedEdgeR | R Documentation |
Guess super-enriched peptides based on edgeR fold-change estimates
Description
Guess super-enriched peptides based on edgeR fold-change estimates
Usage
.guessEnrichedEdgeR(object, threshold = 15, fc.name = "logfc")
Arguments
object |
|
threshold |
minimum estimated fc for a peptide to be considered super-enriched. |
fc.name |
assay name corresponding to the assay that stores the edgeR estimated log2 fold-changes. |
Value
logical matrix of the with the same dimensions as object
indicating which peptides are considered super-enriched.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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