vignettes/test_data/new_workflow.R
In axelmuller/geometric2: NURSA annotation aid
library(geometric2)
setwd("more_testing/")
data("biosamps")
gse <- "GSE6346"
get_input(gse)
exprs <- get_eset(gse)
samples <- fread("sample_review.txt")
my_design <- get_design()
fit <- lmFit(exprs, my_design)
fit <- fitting()
contrasts <- get_contrast.matrix()
fit2 <- contrasts.fit(fit, contrasts)
fit3 <- eBayes(fit2)
axelmuller/geometric2 documentation built on May 25, 2019, 6:26 p.m.
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library(geometric2)
setwd("more_testing/")
data("biosamps")
gse <- "GSE6346"
get_input(gse)
exprs <- get_eset(gse)
samples <- fread("sample_review.txt")
my_design <- get_design()
fit <- lmFit(exprs, my_design)
fit <- fitting()
contrasts <- get_contrast.matrix()
fit2 <- contrasts.fit(fit, contrasts)
fit3 <- eBayes(fit2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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