fitness.eps: optimization function

In b2slab/mWISE: Untargeted LC-MS data annotation

Description

Optimization function for epsilon parameter

Usage

fitness.eps(
  eps,
  pca.to.tune,
  k.tuned,
  data.prep,
  IData,
  use = "everything",
  method = "pearson"
)

Arguments

eps	Epsilon parameter test
pca.to.tune	Pca used for optimization
k.tuned	Optimized k value
data.prep	object returned by dataPrep function
IData	Intensity correlation data
use	An optional character string giving a method for computing correlations in the presence of missing values. Default is "everything", but when missing values are present, "pairwise.complete.obs" is required.

Value

results for epsilon optimization

b2slab/mWISE documentation built on Feb. 2, 2022, 12:24 a.m.