fitness: optimization function
In b2slab/mWISE: Untargeted LC-MS data annotation
Description
Usage
Arguments
Value
Description
Optimization function for k parameter
Usage
1
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8
fitness(
k,
pca.to.tune,
data.prep,
IData,
use = "everything",
method = "pearson"
)
Arguments
k
Number of eigenvectors to test
pca.to.tune
Pca used for optimization
data.prep
object returned by dataPrep function
IData
Intensity correlation data
use
An optional character string giving a method for computing correlations
in the presence of missing values. Default is "everything", but when
missing values are present, "pairwise.complete.obs" is required.
Value
Results for k optimization
b2slab/mWISE documentation built on Feb. 2, 2022, 12:24 a.m.
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Description Usage Arguments Value
Description
Optimization function for k parameter
Usage
1 2 3 4 5 6 7 8 | fitness(
k,
pca.to.tune,
data.prep,
IData,
use = "everything",
method = "pearson"
)
|
Arguments
k |
Number of eigenvectors to test |
pca.to.tune |
Pca used for optimization |
data.prep |
object returned by dataPrep function |
IData |
Intensity correlation data |
use |
An optional character string giving a method for computing correlations in the presence of missing values. Default is "everything", but when missing values are present, "pairwise.complete.obs" is required. |
Value
Results for k optimization
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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