em_signatures: Expectation maximization algorithm to estimate the signature...
In bachisiozic/mmsig: A Mutational Signature Fitting Tool for Hematological Cancers
Description
Usage
Arguments
Value
View source: R/em_signatures.R
Description
Expectation maximization algorithm to estimate the signature contribution
Usage
1
em_signatures(sigts.defn, mut.freqs, max.iter, dbg)
Arguments
sigts.defn
mutational signature definitions
mut.freqs
mutational profile of sample
max.iter
maximum number of iterations
dbg
boolean whether to print or not
Value
estimated mutational signature contributions
bachisiozic/mmsig documentation built on Feb. 16, 2021, 12:03 a.m.
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Description Usage Arguments Value
View source: R/em_signatures.R
Description
Expectation maximization algorithm to estimate the signature contribution
Usage
1 | em_signatures(sigts.defn, mut.freqs, max.iter, dbg)
|
Arguments
sigts.defn |
mutational signature definitions |
mut.freqs |
mutational profile of sample |
max.iter |
maximum number of iterations |
dbg |
boolean whether to print or not |
Value
estimated mutational signature contributions
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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