plot_signatures: Plotting function for mmsig package
In bachisiozic/mmsig: A Mutational Signature Fitting Tool for Hematological Cancers
Description
Usage
Arguments
Value
Description
Plotting function for mmsig package
Usage
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plot_signatures(
sig,
sig_order = c("SBS1", "SBS2", "SBS13", "SBS5", "SBS8", "SBS9", "SBS18", "SBS-MM1",
"SBS35"),
samples = FALSE
)
Arguments
sig
data frame of mutational signature estimates in the format from mm_fit_signatures
sig_order
order of signatures to plot in stacked bar chart, from top to bottom
samples
boolean whether or not to plot sample names on the x axis
Value
relative contribution of mutational signatures in each sample
bachisiozic/mmsig documentation built on Feb. 16, 2021, 12:03 a.m.
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Description Usage Arguments Value
Description
Plotting function for mmsig package
Usage
1 2 3 4 5 6 | plot_signatures(
sig,
sig_order = c("SBS1", "SBS2", "SBS13", "SBS5", "SBS8", "SBS9", "SBS18", "SBS-MM1",
"SBS35"),
samples = FALSE
)
|
Arguments
sig |
data frame of mutational signature estimates in the format from mm_fit_signatures |
sig_order |
order of signatures to plot in stacked bar chart, from top to bottom |
samples |
boolean whether or not to plot sample names on the x axis |
Value
relative contribution of mutational signatures in each sample
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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