Description Usage Arguments Value
View source: R/fit_signatures.R
Signature fitting function for mmsig
1 2 3 4 5 6 7 8 | fit_signatures(
samples.muts,
consigts.defn,
sigt.profs,
cos_sim_threshold,
force_include,
dbg = dbg
)
|
samples.muts |
96 classes mutational profile for all samples |
consigts.defn |
96 classes mutational profile for mutational signature reference |
sigt.profs |
which signatures to fit for each sample |
cos_sim_threshold |
cosine similarity threshold to remove signatures |
force_include |
vector with the names of signatures to always keep in the final profile of every sample |
dbg |
boolean whether to print or not |
estimated mutational signature profile of all samples
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