gibbsmat: Plot Gibbs sampler output

In bbolker/mixstock: Functions for Mixed Stock Analysis

Plot Gibbs sampler output

Description

plot or report on output from Gibbs sampler

Usage

gibbsmat(x, burnin = 500, R = 2, H = 2, trans = TRUE)
gibbsrpt(x,burnin=500,R=2,H=2,trans=TRUE,plot=TRUE)
plotvar(vec,best,name,...)

Arguments

x	results of an MCMC fit
burnin	length of burn-in period for chain
R	number of rookeries
H	number of haplotypes
trans	transform chain values?
plot	plot posterior distributions for each variable?
vec	numeric vector (posterior distribution chain)
best	best-fit/point estimate value
name	name of variable, for x label
...	other arguments to plot

Value

sets up an array of plots on the current output device

bbolker/mixstock documentation built on July 23, 2024, 12:18 p.m.