Description Usage Arguments Author(s) References
View source: R/get_PD_sample.R
Orders the tips which will sequentially get extinct/be sampled, based on relative species abundance as explained in the main text of the article.
1 | get_extinction_list(N, tree, equal.ab = TRUE)
|
N |
Tip nuber |
tree |
A phylo object |
equal.ab |
If set to TRUE (the default), all species have the same probability to go extinct first |
Odile Maliet, Fanny Gascuel & Amaury Lambert
Maliet O., Gascuel F., Lambert A. (2018) Ranked tree shapes, non-random extinctions and the loss of phylogenetic diversity, bioRxiv 224295, doi: https://doi.org/10.1101/224295
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